Baseshift runs your entire genomic analysis pipeline autonomously. From raw sequencing data to annotated variant reports. No bioinformatics team required.
Start Analyzing →Traditional genomic analysis requires a team of specialists and days of manual work. Baseshift compresses the entire workflow into an autonomous agent that processes, analyzes, and reports.
Drop in FASTQ, BAM, or VCF files from any sequencer. Illumina, PacBio, Oxford Nanopore.
AI agents run alignment, quality control, and variant detection. SNVs, indels, structural variants.
Every variant annotated against ClinVar, COSMIC, gnomAD, and OMIM. Pathogenicity scored automatically.
Publication-ready reports with variant classifications, population frequencies, and actionable findings.
Designed by scientists who have spent years at the bench. Every feature exists because manual analysis demanded it.
Works with data from any major sequencing platform. No vendor lock-in. Upload from Illumina, PacBio, Nanopore, or BGI.
Watch your analysis run in real time. No black boxes, no overnight batch jobs. Results stream as they're computed.
AI cross-references every variant against clinical databases, published literature, and population studies for context.
Clinical-grade reports generated automatically. Variant tables, pathogenicity scores, and actionable findings in clean, shareable formats.
Every day, sequencing data sits waiting for a specialist who's backlogged for weeks. Baseshift exists to eliminate that bottleneck entirely. Autonomous AI agents that understand genomics the way your best bioinformatician does, running nonstop, at scale.